STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_06605Uncharacterized protein. (453 aa)    
Predicted Functional Partners:
PTRG_02011
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.707
PTRG_01082
S-phase kinase-associated protein 1A; Belongs to the SKP1 family.
    
 
 0.644
PTRG_00414
Serine/threonine-protein phosphatase.
  
  
 0.432
PTRG_07403
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
  
  
 0.432
PTRG_07121
Serine/threonine-protein phosphatase.
  
  
 0.432
PTRG_08950
Serine/threonine-protein phosphatase.
  
  
 0.432
PTRG_09022
Serine/threonine-protein phosphatase.
  
  
 0.432
PTRG_09132
Serine/threonine-protein phosphatase.
  
  
 0.432
PTRG_09477
Serine/threonine protein phosphatase.
  
  
 0.432
PTRG_11031
Serine/threonine-protein phosphatase.
  
  
 0.432
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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