Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_01020 | PTRG_03712 | B2VUG4 | B2W2R4 | Ankyrin repeat domain containing protein. | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.454 |
PTRG_01020 | PTRG_06828 | B2VUG4 | B2WA20 | Ankyrin repeat domain containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.548 |
PTRG_01020 | PTRG_07609 | B2VUG4 | B2WCA0 | Ankyrin repeat domain containing protein. | NADH dehydrogenase iron-sulfur protein 2, mitochondrial; Belongs to the complex I 49 kDa subunit family. | 0.746 |
PTRG_01020 | PTRG_09847 | B2VUG4 | B2WIN8 | Ankyrin repeat domain containing protein. | NADH-ubiquinone oxidoreductase B18 subunit family protein. | 0.468 |
PTRG_01020 | PTRG_09955 | B2VUG4 | B2WIZ6 | Ankyrin repeat domain containing protein. | DNA polymerase. | 0.492 |
PTRG_02984 | PTRG_06828 | B2VZZ4 | B2WA20 | DNA polymerase subunit delta-2. | Zn(2)-C6 fungal-type domain-containing protein. | 0.568 |
PTRG_02984 | PTRG_09955 | B2VZZ4 | B2WIZ6 | DNA polymerase subunit delta-2. | DNA polymerase. | 0.999 |
PTRG_03187 | PTRG_03712 | B2VXE1 | B2W2R4 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.999 |
PTRG_03187 | PTRG_06828 | B2VXE1 | B2WA20 | Uncharacterized protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.534 |
PTRG_03187 | PTRG_07609 | B2VXE1 | B2WCA0 | Uncharacterized protein. | NADH dehydrogenase iron-sulfur protein 2, mitochondrial; Belongs to the complex I 49 kDa subunit family. | 0.999 |
PTRG_03187 | PTRG_09847 | B2VXE1 | B2WIN8 | Uncharacterized protein. | NADH-ubiquinone oxidoreductase B18 subunit family protein. | 0.999 |
PTRG_03712 | PTRG_01020 | B2W2R4 | B2VUG4 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Ankyrin repeat domain containing protein. | 0.454 |
PTRG_03712 | PTRG_03187 | B2W2R4 | B2VXE1 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Uncharacterized protein. | 0.999 |
PTRG_03712 | PTRG_06828 | B2W2R4 | B2WA20 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | Zn(2)-C6 fungal-type domain-containing protein. | 0.601 |
PTRG_03712 | PTRG_07609 | B2W2R4 | B2WCA0 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | NADH dehydrogenase iron-sulfur protein 2, mitochondrial; Belongs to the complex I 49 kDa subunit family. | 0.999 |
PTRG_03712 | PTRG_09847 | B2W2R4 | B2WIN8 | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | NADH-ubiquinone oxidoreductase B18 subunit family protein. | 0.999 |
PTRG_04433 | PTRG_06828 | B2W1U8 | B2WA20 | SMN domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.566 |
PTRG_05712 | PTRG_06828 | B2W7C4 | B2WA20 | DNA repair endonuclease XPF. | Zn(2)-C6 fungal-type domain-containing protein. | 0.567 |
PTRG_05712 | PTRG_09955 | B2W7C4 | B2WIZ6 | DNA repair endonuclease XPF. | DNA polymerase. | 0.662 |
PTRG_06828 | PTRG_01020 | B2WA20 | B2VUG4 | Zn(2)-C6 fungal-type domain-containing protein. | Ankyrin repeat domain containing protein. | 0.548 |
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