STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_07335Anaphase-promoting complex protein. (746 aa)    
Predicted Functional Partners:
PTRG_00313
Nuclear protein bimA.
   
 0.999
PTRG_03205
Negative regulator of mitosis.
   
 0.999
PTRG_06258
Anaphase-promoting complex subunit Apc2; Belongs to the cullin family.
    
 0.999
PTRG_07395
Uncharacterized protein.
    
 0.999
PTRG_09532
Anaphase-promoting complex subunit Cut9.
   
 0.999
PTRG_10330
Anaphase-promoting complex subunit 10.
   
 0.999
PTRG_10204
Uncharacterized protein.
   
 0.999
PTRG_11082
Anaphase-promoting complex subunit CDC23.
   
 0.999
PTRG_11410
Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.994
PTRG_01792
Mitotic spindle checkpoint component mad3.
    
 0.985
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.