STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_07429Pyruvate kinase; Belongs to the pyruvate kinase family. (527 aa)    
Predicted Functional Partners:
PTRG_02789
Enolase.
  
 0.985
PTRG_11238
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.983
PTRG_07837
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.972
PTRG_09868
60S ribosomal protein L5-B.
  
 
 0.963
PTRG_00987
60S ribosomal protein L25.
  
 
 0.960
PTRG_00836
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.956
PTRG_00528
KOW domain-containing protein.
  
   0.955
PTRG_00062
40S ribosomal protein S3-2; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.954
PTRG_08145
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
  
 0.949
PTRG_10093
L-lactate dehydrogenase A; Belongs to the LDH/MDH superfamily.
  
 0.948
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.