STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rtc5Restriction of telomere capping protein 5; May be involved in a process influencing telomere capping. Belongs to the RTC5 family. (624 aa)    
Predicted Functional Partners:
PTRG_02270
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B.
  
 0.800
PTRG_07238
Aspartyl-tRNA synthetase.
  
 0.632
PTRG_09771
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.529
PTRG_01026
Uncharacterized protein.
  
 0.501
PTRG_01101
60S ribosomal protein L39.
  
 0.501
PTRG_05121
Glutaminyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.501
PTRG_09469
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.501
PTRG_06254
Asparaginyl-tRNA synthetase.
   
 0.488
PTRG_01759
Asparaginyl-tRNA synthetase.
   
 0.487
PTRG_07355
Aspartyl-tRNA synthetase.
   
 0.487
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.