Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00585 | PTRG_01020 | B2VQY8 | B2VUG4 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Ankyrin repeat domain containing protein. | 0.644 |
PTRG_00585 | PTRG_01491 | B2VQY8 | B2VWC9 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Ubiquitin. | 0.721 |
PTRG_00585 | PTRG_04512 | B2VQY8 | B2W4G2 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | DNA repair protein rad50. | 0.999 |
PTRG_00585 | PTRG_05951 | B2VQY8 | B2W813 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.990 |
PTRG_00585 | PTRG_06876 | B2VQY8 | B2WB64 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | ATP-dependent DNA helicase pcrA. | 0.798 |
PTRG_00585 | PTRG_06883 | B2VQY8 | B2WB71 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Endoglucanase II. | 0.961 |
PTRG_01020 | PTRG_00585 | B2VUG4 | B2VQY8 | Ankyrin repeat domain containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.644 |
PTRG_01020 | PTRG_01491 | B2VUG4 | B2VWC9 | Ankyrin repeat domain containing protein. | Ubiquitin. | 0.993 |
PTRG_01020 | PTRG_01747 | B2VUG4 | B2VSC1 | Ankyrin repeat domain containing protein. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.692 |
PTRG_01020 | PTRG_03876 | B2VUG4 | B2W378 | Ankyrin repeat domain containing protein. | MHYT domain-containing protein. | 0.783 |
PTRG_01020 | PTRG_04512 | B2VUG4 | B2W4G2 | Ankyrin repeat domain containing protein. | DNA repair protein rad50. | 0.589 |
PTRG_01020 | PTRG_05951 | B2VUG4 | B2W813 | Ankyrin repeat domain containing protein. | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.730 |
PTRG_01020 | PTRG_06883 | B2VUG4 | B2WB71 | Ankyrin repeat domain containing protein. | Endoglucanase II. | 0.616 |
PTRG_01491 | PTRG_00585 | B2VWC9 | B2VQY8 | Ubiquitin. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.721 |
PTRG_01491 | PTRG_01020 | B2VWC9 | B2VUG4 | Ubiquitin. | Ankyrin repeat domain containing protein. | 0.993 |
PTRG_01491 | PTRG_01747 | B2VWC9 | B2VSC1 | Ubiquitin. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.692 |
PTRG_01491 | PTRG_05951 | B2VWC9 | B2W813 | Ubiquitin. | Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. | 0.651 |
PTRG_01491 | PTRG_06883 | B2VWC9 | B2WB71 | Ubiquitin. | Endoglucanase II. | 0.569 |
PTRG_01491 | PTRG_11499 | B2VWC9 | B2WN50 | Ubiquitin. | Uncharacterized protein. | 0.638 |
PTRG_01747 | PTRG_01020 | B2VSC1 | B2VUG4 | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | Ankyrin repeat domain containing protein. | 0.692 |
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