STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_06931Protein kinase domain-containing protein. (337 aa)    
Predicted Functional Partners:
PTRG_08080
SRF-type transcription factor RlmA.
    
 0.862
PTRG_01020
Ankyrin repeat domain containing protein.
    
 0.806
PTRG_01827
Transcription factor prr1.
    
 0.784
PTRG_03252
Uncharacterized protein.
    
 0.732
PTRG_04143
Uncharacterized protein.
    
 0.732
PTRG_10723
Cel61b.
    
 0.732
PTRG_09925
Tyrosine-protein phosphatase CDC14.
    
 0.726
PTRG_05107
Rho-type GTPase-activating protein 2.
    
 
 0.705
PTRG_02663
Uncharacterized protein.
    
 0.695
PTRG_05994
Guanine nucleotide-binding protein subunit beta.
   
 0.674
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.