STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mef1Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (801 aa)    
Predicted Functional Partners:
PTRG_02804
Meiotically up-regulated gene 71 protein.
    
 0.988
PTRG_00062
40S ribosomal protein S3-2; Belongs to the universal ribosomal protein uS3 family.
  
 0.943
PTRG_09868
60S ribosomal protein L5-B.
  
 0.943
PTRG_00466
60S ribosomal protein L35.
  
 0.942
PTRG_00987
60S ribosomal protein L25.
  
 0.942
PTRG_07837
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.942
PTRG_05941
37S ribosomal protein Mrp17.
  
 
 0.939
PTRG_02180
Mitochondrial ribosomal protein s24.
  
 
 0.937
PTRG_00528
KOW domain-containing protein.
  
 0.935
PTRG_07479
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.934
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
Server load: low (14%) [HD]