Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_02077 | PTRG_07801 | B2VUA4 | B2WCU2 | FAD binding domain containing protein. | Probable lysosomal cobalamin transporter; Probable lysosomal cobalamin transporter. Required to export cobalamin from lysosomes allowing its conversion to cofactors (By similarity); Belongs to the LIMR family. LMBRD1 subfamily. | 0.448 |
PTRG_02779 | PTRG_07801 | B2VZD9 | B2WCU2 | Small nucleolar ribonucleoprotein complex subunit. | Probable lysosomal cobalamin transporter; Probable lysosomal cobalamin transporter. Required to export cobalamin from lysosomes allowing its conversion to cofactors (By similarity); Belongs to the LIMR family. LMBRD1 subfamily. | 0.445 |
PTRG_04648 | PTRG_05824 | B2W4U8 | B2W7N6 | ATP-binding cassette protein. | ATP-binding cassette protein. | 0.912 |
PTRG_04648 | PTRG_07801 | B2W4U8 | B2WCU2 | ATP-binding cassette protein. | Probable lysosomal cobalamin transporter; Probable lysosomal cobalamin transporter. Required to export cobalamin from lysosomes allowing its conversion to cofactors (By similarity); Belongs to the LIMR family. LMBRD1 subfamily. | 0.745 |
PTRG_05824 | PTRG_04648 | B2W7N6 | B2W4U8 | ATP-binding cassette protein. | ATP-binding cassette protein. | 0.912 |
PTRG_05824 | PTRG_07801 | B2W7N6 | B2WCU2 | ATP-binding cassette protein. | Probable lysosomal cobalamin transporter; Probable lysosomal cobalamin transporter. Required to export cobalamin from lysosomes allowing its conversion to cofactors (By similarity); Belongs to the LIMR family. LMBRD1 subfamily. | 0.745 |
PTRG_07801 | PTRG_02077 | B2WCU2 | B2VUA4 | Probable lysosomal cobalamin transporter; Probable lysosomal cobalamin transporter. Required to export cobalamin from lysosomes allowing its conversion to cofactors (By similarity); Belongs to the LIMR family. LMBRD1 subfamily. | FAD binding domain containing protein. | 0.448 |
PTRG_07801 | PTRG_02779 | B2WCU2 | B2VZD9 | Probable lysosomal cobalamin transporter; Probable lysosomal cobalamin transporter. Required to export cobalamin from lysosomes allowing its conversion to cofactors (By similarity); Belongs to the LIMR family. LMBRD1 subfamily. | Small nucleolar ribonucleoprotein complex subunit. | 0.445 |
PTRG_07801 | PTRG_04648 | B2WCU2 | B2W4U8 | Probable lysosomal cobalamin transporter; Probable lysosomal cobalamin transporter. Required to export cobalamin from lysosomes allowing its conversion to cofactors (By similarity); Belongs to the LIMR family. LMBRD1 subfamily. | ATP-binding cassette protein. | 0.745 |
PTRG_07801 | PTRG_05824 | B2WCU2 | B2W7N6 | Probable lysosomal cobalamin transporter; Probable lysosomal cobalamin transporter. Required to export cobalamin from lysosomes allowing its conversion to cofactors (By similarity); Belongs to the LIMR family. LMBRD1 subfamily. | ATP-binding cassette protein. | 0.745 |