Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00717 | PTRG_01171 | B2VST3 | B2VVA4 | DNA replication helicase Dna2. | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | 0.588 |
PTRG_00717 | PTRG_01945 | B2VST3 | B2VTI1 | DNA replication helicase Dna2. | Uncharacterized protein. | 0.588 |
PTRG_00717 | PTRG_03187 | B2VST3 | B2VXE1 | DNA replication helicase Dna2. | Uncharacterized protein. | 0.588 |
PTRG_00717 | PTRG_03712 | B2VST3 | B2W2R4 | DNA replication helicase Dna2. | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.588 |
PTRG_00717 | PTRG_05090 | B2VST3 | B2W3P0 | DNA replication helicase Dna2. | Uncharacterized protein. | 0.836 |
PTRG_00717 | PTRG_05741 | B2VST3 | B2W7F3 | DNA replication helicase Dna2. | Uncharacterized protein. | 0.588 |
PTRG_00717 | PTRG_07892 | B2VST3 | B2WD33 | DNA replication helicase Dna2. | Uncharacterized protein. | 0.706 |
PTRG_00717 | PTRG_08003 | B2VST3 | B2WDE4 | DNA replication helicase Dna2. | NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial. | 0.836 |
PTRG_00717 | PTRG_08530 | B2VST3 | B2WEF7 | DNA replication helicase Dna2. | Uncharacterized protein. | 0.588 |
PTRG_01168 | PTRG_07892 | B2VVA1 | B2WD33 | AP-2 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. | Uncharacterized protein. | 0.708 |
PTRG_01171 | PTRG_00717 | B2VVA4 | B2VST3 | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | DNA replication helicase Dna2. | 0.588 |
PTRG_01171 | PTRG_01945 | B2VVA4 | B2VTI1 | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | Uncharacterized protein. | 0.928 |
PTRG_01171 | PTRG_03187 | B2VVA4 | B2VXE1 | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | Uncharacterized protein. | 0.999 |
PTRG_01171 | PTRG_03712 | B2VVA4 | B2W2R4 | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. | 0.999 |
PTRG_01171 | PTRG_05090 | B2VVA4 | B2W3P0 | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | Uncharacterized protein. | 0.976 |
PTRG_01171 | PTRG_05741 | B2VVA4 | B2W7F3 | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | Uncharacterized protein. | 0.588 |
PTRG_01171 | PTRG_07892 | B2VVA4 | B2WD33 | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | Uncharacterized protein. | 0.618 |
PTRG_01171 | PTRG_08003 | B2VVA4 | B2WDE4 | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | NADH-ubiquinone oxidoreductase 12 kDa subunit, mitochondrial. | 0.999 |
PTRG_01171 | PTRG_08530 | B2VVA4 | B2WEF7 | NADH-ubiquinone oxidoreductase 14.8 kd subunit. | Uncharacterized protein. | 0.983 |
PTRG_01945 | PTRG_00717 | B2VTI1 | B2VST3 | Uncharacterized protein. | DNA replication helicase Dna2. | 0.588 |
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