STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_07951CAP-Gly domain-containing protein. (735 aa)    
Predicted Functional Partners:
PTRG_00179
Microtubule-associated protein RP/EB family member 1.
    
 
 0.954
PTRG_02781
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.946
PTRG_01528
Spindle pole body component alp14.
    
 
 0.871
PTRG_07357
Kelch domain-containing protein 3.
    
 
 0.860
PTRG_08546
Phosphatidylinositol 3-kinase tor2; Belongs to the PI3/PI4-kinase family.
   
 0.859
PTRG_05825
CAP-Gly domain-containing protein.
    
 
0.857
PTRG_11609
Uncharacterized protein.
    
 
 0.803
PTRG_07776
Uncharacterized protein.
    
 
 0.777
PTRG_03132
Dynein heavy chain.
    
 0.775
pac1
Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family.
    
 
 0.754
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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