Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00179 | PTRG_01528 | B2VRR7 | B2VWG6 | Microtubule-associated protein RP/EB family member 1. | Spindle pole body component alp14. | 0.954 |
PTRG_00179 | PTRG_02781 | B2VRR7 | B2VZE1 | Microtubule-associated protein RP/EB family member 1. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.944 |
PTRG_00179 | PTRG_03132 | B2VRR7 | B2VX86 | Microtubule-associated protein RP/EB family member 1. | Dynein heavy chain. | 0.779 |
PTRG_00179 | PTRG_05825 | B2VRR7 | B2W7N7 | Microtubule-associated protein RP/EB family member 1. | CAP-Gly domain-containing protein. | 0.853 |
PTRG_00179 | PTRG_07357 | B2VRR7 | B2WAP4 | Microtubule-associated protein RP/EB family member 1. | Kelch domain-containing protein 3. | 0.573 |
PTRG_00179 | PTRG_07776 | B2VRR7 | B2WCR7 | Microtubule-associated protein RP/EB family member 1. | Uncharacterized protein. | 0.773 |
PTRG_00179 | PTRG_07951 | B2VRR7 | B2WD92 | Microtubule-associated protein RP/EB family member 1. | CAP-Gly domain-containing protein. | 0.954 |
PTRG_00179 | PTRG_11609 | B2VRR7 | B2WNP9 | Microtubule-associated protein RP/EB family member 1. | Uncharacterized protein. | 0.892 |
PTRG_00179 | pac1 | B2VRR7 | B2VWG7 | Microtubule-associated protein RP/EB family member 1. | Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. | 0.707 |
PTRG_01528 | PTRG_00179 | B2VWG6 | B2VRR7 | Spindle pole body component alp14. | Microtubule-associated protein RP/EB family member 1. | 0.954 |
PTRG_01528 | PTRG_02781 | B2VWG6 | B2VZE1 | Spindle pole body component alp14. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.722 |
PTRG_01528 | PTRG_03132 | B2VWG6 | B2VX86 | Spindle pole body component alp14. | Dynein heavy chain. | 0.433 |
PTRG_01528 | PTRG_07357 | B2VWG6 | B2WAP4 | Spindle pole body component alp14. | Kelch domain-containing protein 3. | 0.516 |
PTRG_01528 | PTRG_07951 | B2VWG6 | B2WD92 | Spindle pole body component alp14. | CAP-Gly domain-containing protein. | 0.871 |
PTRG_01528 | PTRG_11609 | B2VWG6 | B2WNP9 | Spindle pole body component alp14. | Uncharacterized protein. | 0.607 |
PTRG_01528 | pac1 | B2VWG6 | B2VWG7 | Spindle pole body component alp14. | Nuclear distribution protein PAC1; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs; Belongs to the WD repeat LIS1/nudF family. | 0.682 |
PTRG_02781 | PTRG_00179 | B2VZE1 | B2VRR7 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Microtubule-associated protein RP/EB family member 1. | 0.944 |
PTRG_02781 | PTRG_01528 | B2VZE1 | B2VWG6 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Spindle pole body component alp14. | 0.722 |
PTRG_02781 | PTRG_03132 | B2VZE1 | B2VX86 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Dynein heavy chain. | 0.783 |
PTRG_02781 | PTRG_05825 | B2VZE1 | B2W7N7 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | CAP-Gly domain-containing protein. | 0.673 |
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