Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_01433 | PTRG_01491 | B2VW71 | B2VWC9 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin. | 0.898 |
PTRG_01433 | PTRG_06487 | B2VW71 | B2W929 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | Thyroid hormone receptor interactor 12. | 0.640 |
PTRG_01433 | PTRG_07477 | B2VW71 | B2WB14 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.984 |
PTRG_01433 | PTRG_07963 | B2VW71 | B2WDA4 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | NEDD8-activating enzyme E1 catalytic subunit. | 0.985 |
PTRG_01433 | PTRG_08825 | B2VW71 | B2WFW9 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. | 0.978 |
PTRG_01433 | PTRG_08907 | B2VW71 | B2WG51 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-like modifier SUMO. | 0.493 |
PTRG_01433 | PTRG_08990 | B2VW71 | B2WGD4 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family. | 0.937 |
PTRG_01433 | PTRG_11523 | B2VW71 | B2WN74 | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | Neural cell expressed. | 0.998 |
PTRG_01491 | PTRG_01433 | B2VWC9 | B2VW71 | Ubiquitin. | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | 0.898 |
PTRG_01491 | PTRG_06487 | B2VWC9 | B2W929 | Ubiquitin. | Thyroid hormone receptor interactor 12. | 0.996 |
PTRG_01491 | PTRG_07477 | B2VWC9 | B2WB14 | Ubiquitin. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.997 |
PTRG_01491 | PTRG_07963 | B2VWC9 | B2WDA4 | Ubiquitin. | NEDD8-activating enzyme E1 catalytic subunit. | 0.888 |
PTRG_01491 | PTRG_08825 | B2VWC9 | B2WFW9 | Ubiquitin. | NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme. | 0.754 |
PTRG_01491 | PTRG_08907 | B2VWC9 | B2WG51 | Ubiquitin. | Ubiquitin-like modifier SUMO. | 0.883 |
PTRG_01491 | PTRG_08990 | B2VWC9 | B2WGD4 | Ubiquitin. | Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family. | 0.999 |
PTRG_01491 | PTRG_11523 | B2VWC9 | B2WN74 | Ubiquitin. | Neural cell expressed. | 0.858 |
PTRG_01491 | cnxH | B2VWC9 | B2WBW4 | Ubiquitin. | Molybdopterin synthase catalytic subunit; Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group. | 0.477 |
PTRG_06487 | PTRG_01433 | B2W929 | B2VW71 | Thyroid hormone receptor interactor 12. | NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family. | 0.640 |
PTRG_06487 | PTRG_01491 | B2W929 | B2VWC9 | Thyroid hormone receptor interactor 12. | Ubiquitin. | 0.996 |
PTRG_06487 | PTRG_07477 | B2W929 | B2WB14 | Thyroid hormone receptor interactor 12. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.939 |
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