STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_07971Citrate lyase subunit beta (Citrate (Pro-3S)-lyase subunit beta). (322 aa)    
Predicted Functional Partners:
PTRG_04937
Heat shock protein Hsp88.
   
 0.710
PTRG_11256
Heat shock 70 kDa protein, mitochondrial; Belongs to the heat shock protein 70 family.
   
 0.703
PTRG_06604
Heat shock 70 kDa protein C; Belongs to the heat shock protein 70 family.
   
 0.700
PTRG_03336
Flavin_Reduct domain-containing protein.
   
 0.680
PTRG_07391
Heat shock protein 90.
   
 0.680
PTRG_08804
Uncharacterized protein.
   
 0.680
PTRG_10549
Chaperone protein dnaK.
   
 0.606
PTRG_01200
Cyanovirin-N family protein.
   
 0.604
PTRG_02502
Hsp70 family protein.
   
 0.604
PTRG_02664
Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family.
   
 0.604
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.