STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_0811726S protease regulatory subunit 7; Belongs to the AAA ATPase family. (438 aa)    
Predicted Functional Partners:
PTRG_00629
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
  
0.999
PTRG_02207
26S proteasome non-ATPase regulatory subunit 11.
   
 0.999
PTRG_03290
26S proteasome non-ATPase regulatory subunit 13.
   
 0.999
PTRG_03339
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
  
0.999
PTRG_02716
26S protease regulatory subunit S10B; Belongs to the AAA ATPase family.
  
0.999
PTRG_04019
26S proteasome regulatory subunit rpn-8.
   
 0.999
PTRG_04026
Proteasome subunit alpha type.
   
 0.999
PTRG_03438
Proteasome subunit alpha type.
   
 0.999
PTRG_05719
Proteasome subunit alpha type.
   
 0.999
PTRG_06444
Proteasome subunit beta type-9.
   
 0.999
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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