Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00508 | PTRG_06329 | B2VQU8 | B2W8M1 | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | HUN domain-containing protein. | 0.957 |
PTRG_00508 | PTRG_08350 | B2VQU8 | B2WDX7 | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | Uncharacterized protein. | 0.572 |
PTRG_00508 | PTRG_10865 | B2VQU8 | B2WLK5 | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | Histone acetyltransferase type B subunit 2. | 0.784 |
PTRG_01020 | PTRG_08350 | B2VUG4 | B2WDX7 | Ankyrin repeat domain containing protein. | Uncharacterized protein. | 0.548 |
PTRG_01020 | PTRG_09955 | B2VUG4 | B2WIZ6 | Ankyrin repeat domain containing protein. | DNA polymerase. | 0.492 |
PTRG_02984 | PTRG_08350 | B2VZZ4 | B2WDX7 | DNA polymerase subunit delta-2. | Uncharacterized protein. | 0.568 |
PTRG_02984 | PTRG_09955 | B2VZZ4 | B2WIZ6 | DNA polymerase subunit delta-2. | DNA polymerase. | 0.999 |
PTRG_04433 | PTRG_07949 | B2W1U8 | B2WD90 | SMN domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.961 |
PTRG_04433 | PTRG_08350 | B2W1U8 | B2WDX7 | SMN domain-containing protein. | Uncharacterized protein. | 0.566 |
PTRG_04433 | PTRG_11282 | B2W1U8 | B2WMS2 | SMN domain-containing protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.969 |
PTRG_05712 | PTRG_08350 | B2W7C4 | B2WDX7 | DNA repair endonuclease XPF. | Uncharacterized protein. | 0.567 |
PTRG_05712 | PTRG_09955 | B2W7C4 | B2WIZ6 | DNA repair endonuclease XPF. | DNA polymerase. | 0.662 |
PTRG_06329 | PTRG_00508 | B2W8M1 | B2VQU8 | HUN domain-containing protein. | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.957 |
PTRG_06329 | PTRG_08350 | B2W8M1 | B2WDX7 | HUN domain-containing protein. | Uncharacterized protein. | 0.523 |
PTRG_07949 | PTRG_04433 | B2WD90 | B2W1U8 | Small nuclear ribonucleoprotein G. | SMN domain-containing protein. | 0.961 |
PTRG_07949 | PTRG_08350 | B2WD90 | B2WDX7 | Small nuclear ribonucleoprotein G. | Uncharacterized protein. | 0.489 |
PTRG_07949 | PTRG_11282 | B2WD90 | B2WMS2 | Small nuclear ribonucleoprotein G. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.999 |
PTRG_08350 | PTRG_00508 | B2WDX7 | B2VQU8 | Uncharacterized protein. | Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. | 0.572 |
PTRG_08350 | PTRG_01020 | B2WDX7 | B2VUG4 | Uncharacterized protein. | Ankyrin repeat domain containing protein. | 0.548 |
PTRG_08350 | PTRG_02984 | B2WDX7 | B2VZZ4 | Uncharacterized protein. | DNA polymerase subunit delta-2. | 0.568 |
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