STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_08350Uncharacterized protein. (2045 aa)    
Predicted Functional Partners:
PTRG_00508
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 
 0.572
PTRG_02984
DNA polymerase subunit delta-2.
    
 0.568
PTRG_05712
DNA repair endonuclease XPF.
    
 0.567
PTRG_04433
SMN domain-containing protein.
    
 0.566
PTRG_09955
DNA polymerase.
   
 0.563
PTRG_01020
Ankyrin repeat domain containing protein.
    
  0.548
PTRG_10865
Histone acetyltransferase type B subunit 2.
    
  0.539
PTRG_06329
HUN domain-containing protein.
    
 
 0.523
PTRG_11282
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.522
PTRG_07949
Small nuclear ribonucleoprotein G.
    
  0.489
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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