Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00144 | PTRG_00904 | B2VRG3 | B2VTQ9 | Ribosome biogenesis protein RLP24. | Nucleolar GTP-binding protein 2. | 0.990 |
PTRG_00144 | PTRG_01864 | B2VRG3 | B2VT28 | Ribosome biogenesis protein RLP24. | 60S ribosomal protein L30. | 0.972 |
PTRG_00144 | PTRG_02566 | B2VRG3 | B2VYS6 | Ribosome biogenesis protein RLP24. | RNA helicase. | 0.982 |
PTRG_00144 | PTRG_04220 | B2VRG3 | B2W185 | Ribosome biogenesis protein RLP24. | 60S ribosomal protein L31. | 0.981 |
PTRG_00144 | PTRG_04434 | B2VRG3 | B2W1U9 | Ribosome biogenesis protein RLP24. | MKI67 FHA domain interacting nucleolar phosphoprotein. | 0.992 |
PTRG_00144 | PTRG_05577 | B2VRG3 | B2W6Y9 | Ribosome biogenesis protein RLP24. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.705 |
PTRG_00144 | PTRG_06871 | B2VRG3 | B2WB59 | Ribosome biogenesis protein RLP24. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.994 |
PTRG_00144 | PTRG_08383 | B2VRG3 | B2WE10 | Ribosome biogenesis protein RLP24. | Uncharacterized protein. | 0.986 |
PTRG_00144 | PTRG_11295 | B2VRG3 | B2WMT5 | Ribosome biogenesis protein RLP24. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
PTRG_00144 | nop7 | B2VRG3 | B2WBA7 | Ribosome biogenesis protein RLP24. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.990 |
PTRG_00904 | PTRG_00144 | B2VTQ9 | B2VRG3 | Nucleolar GTP-binding protein 2. | Ribosome biogenesis protein RLP24. | 0.990 |
PTRG_00904 | PTRG_01864 | B2VTQ9 | B2VT28 | Nucleolar GTP-binding protein 2. | 60S ribosomal protein L30. | 0.898 |
PTRG_00904 | PTRG_02566 | B2VTQ9 | B2VYS6 | Nucleolar GTP-binding protein 2. | RNA helicase. | 0.995 |
PTRG_00904 | PTRG_04220 | B2VTQ9 | B2W185 | Nucleolar GTP-binding protein 2. | 60S ribosomal protein L31. | 0.900 |
PTRG_00904 | PTRG_04434 | B2VTQ9 | B2W1U9 | Nucleolar GTP-binding protein 2. | MKI67 FHA domain interacting nucleolar phosphoprotein. | 0.997 |
PTRG_00904 | PTRG_06871 | B2VTQ9 | B2WB59 | Nucleolar GTP-binding protein 2. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.998 |
PTRG_00904 | PTRG_08383 | B2VTQ9 | B2WE10 | Nucleolar GTP-binding protein 2. | Uncharacterized protein. | 0.977 |
PTRG_00904 | PTRG_11295 | B2VTQ9 | B2WMT5 | Nucleolar GTP-binding protein 2. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.998 |
PTRG_00904 | nop7 | B2VTQ9 | B2WBA7 | Nucleolar GTP-binding protein 2. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
PTRG_01864 | PTRG_00144 | B2VT28 | B2VRG3 | 60S ribosomal protein L30. | Ribosome biogenesis protein RLP24. | 0.972 |
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