STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_08552Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
PTRG_10394
Elongation factor 1-gamma 1.
   
 0.999
PTRG_01827
Transcription factor prr1.
   
 0.984
PTRG_00550
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.983
PTRG_07228
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.951
PTRG_00991
Eukaryotic peptide chain release factor subunit 1.
   
 0.946
PTRG_05025
Elongation factor 3.
   
 
 0.944
rps1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.943
PTRG_00062
40S ribosomal protein S3-2; Belongs to the universal ribosomal protein uS3 family.
   
 0.935
PTRG_10395
Uncharacterized protein.
   
 0.923
PTRG_05577
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.913
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.