STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_08162Uncharacterized protein. (614 aa)    
Predicted Functional Partners:
PTRG_04973
Nitrate reductase.
    
  0.791
PTRG_06740
Uncharacterized protein.
  
 
  0.547
PTRG_00533
Mitochondrial ribosomal protein subunit S18.
    
  0.532
PTRG_02180
Mitochondrial ribosomal protein s24.
   
  0.531
PTRG_03233
37S ribosomal protein MRP4, mitochondrial.
   
  0.531
PTRG_02325
Uncharacterized protein.
   
  0.531
PTRG_06050
L51_S25_CI-B8 domain-containing protein.
    
  0.531
PTRG_05941
37S ribosomal protein Mrp17.
    
  0.531
PTRG_10393
40S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
    
  0.531
PTRG_10894
Transcription factor tfiiic complex a box associated subunit sfc1.
    
 0.531
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.