STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_08208Uncharacterized protein. (278 aa)    
Predicted Functional Partners:
PTRG_03004
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
   
 0.900
PTRG_00097
Adaptor protein complex 3 Mu3A; Belongs to the adaptor complexes medium subunit family.
   
 0.891
PTRG_05300
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.887
PTRG_00081
AP-1 complex subunit gamma.
   
 0.830
PTRG_08791
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.638
PTRG_09815
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.589
PTRG_00572
Uncharacterized protein.
    
  0.574
PTRG_00884
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
  0.574
PTRG_04651
Uncharacterized protein.
    
  0.574
PTRG_01988
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.556
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.