STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_08238Uncharacterized protein. (709 aa)    
Predicted Functional Partners:
PTRG_09564
Ubiquitin-conjugating enzyme E2 15; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.872
PTRG_08990
Ubiquitin-activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
    
 0.820
PTRG_02236
Autophagy-related protein 7.
    
 0.803
PTRG_07855
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.770
PTRG_00630
Ubiquitin-conjugating enzyme E2-24 kDa; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.761
PTRG_09748
Ubiquitin-conjugating enzyme E2 6.
    
 0.760
PTRG_11410
Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.760
PTRG_01621
Ubiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family.
     
 0.749
PTRG_07963
NEDD8-activating enzyme E1 catalytic subunit.
   
 0.748
PTRG_07477
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.730
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.