STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_09023Sentrin 17. (787 aa)    
Predicted Functional Partners:
PTRG_08907
Ubiquitin-like modifier SUMO.
    
 0.999
PTRG_03283
CLP1_P domain-containing protein.
   
 0.984
PTRG_10912
ULP_PROTEASE domain-containing protein.
    
 0.955
PTRG_03384
Importin subunit beta-3.
    
 
 0.934
PTRG_05920
Importin subunit alpha; Belongs to the importin alpha family.
    
 
 0.933
PTRG_07104
WD domain containing protein.
    
 0.876
PTRG_05318
rRNA processing protein Ipi1.
    
 0.864
PTRG_10354
Importin subunit beta-1.
   
 
 0.853
PTRG_07465
Uncharacterized protein.
    
 
 0.834
PTRG_07934
Ran GTPase activating protein 1.
    
 
 0.834
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.