STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_09047Sphingosine-1-phosphate phosphohydrolase. (587 aa)    
Predicted Functional Partners:
PTRG_06012
Sphingosine-1-phosphate lyase 1.
    
 0.951
PTRG_10473
Sphingosine hydroxylase; Belongs to the sterol desaturase family.
    
 0.919
PTRG_11398
Sphingoid long chain base kinase 4.
   
 0.891
PTRG_02220
Sphingosine N-acyltransferase lac1.
    
 0.867
PTRG_10081
Sphingosine N-acyltransferase lac1.
    
 0.867
PTRG_07263
Uncharacterized protein.
    
 0.865
PTRG_02594
Neutral ceramidase.
     
 0.856
PTRG_02009
Inositol phosphosphingolipids phospholipase C.
    
 0.853
PTRG_03930
Dihydroceramide delta(4)-desaturase.
     
 0.844
PTRG_00500
Alkaline ceramidase family protein.
     
 0.835
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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