STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_09350Uncharacterized protein. (256 aa)    
Predicted Functional Partners:
PTRG_08960
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 
 0.864
PTRG_06392
Bifunctional protein GAL10.
  
 
 0.860
PTRG_08615
Galactokinase.
  
 0.701
PTRG_07058
Regucalcin.
  
 
 0.611
PTRG_02854
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
  0.541
PTRG_06486
Nicotinamide-nucleotide adenylyltransferase; Belongs to the eukaryotic NMN adenylyltransferase family.
     
 0.527
PTRG_06211
Tryptophan synthase.
     
 0.457
PTRG_07018
Aspartate-semialdehyde dehydrogenase.
   
 
  0.434
PTRG_09743
Uncharacterized protein.
     
 0.421
PTRG_02793
UDP-glucose 4-epimerase.
  
 
 0.420
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.