Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00581 | PTRG_01412 | B2VQY4 | B2VW50 | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | Ribosomal_S7 domain-containing protein. | 0.999 |
PTRG_00581 | PTRG_02180 | B2VQY4 | B2VUZ7 | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | Mitochondrial ribosomal protein s24. | 0.999 |
PTRG_00581 | PTRG_02379 | B2VQY4 | B2VY89 | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | MRP-S28 domain-containing protein. | 0.999 |
PTRG_00581 | PTRG_04928 | B2VQY4 | B2W5M8 | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | S4 RNA-binding domain-containing protein. | 0.995 |
PTRG_00581 | PTRG_09515 | B2VQY4 | B2WHQ6 | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | Endosomal cargo receptor (Erp3). | 0.874 |
PTRG_00581 | PTRG_11593 | B2VQY4 | B2WNN3 | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | Uncharacterized protein. | 0.996 |
PTRG_00682 | PTRG_09515 | B2VSH8 | B2WHQ6 | TRAF-type zinc finger protein. | Endosomal cargo receptor (Erp3). | 0.945 |
PTRG_01412 | PTRG_00581 | B2VW50 | B2VQY4 | Ribosomal_S7 domain-containing protein. | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
PTRG_01412 | PTRG_02180 | B2VW50 | B2VUZ7 | Ribosomal_S7 domain-containing protein. | Mitochondrial ribosomal protein s24. | 0.999 |
PTRG_01412 | PTRG_02379 | B2VW50 | B2VY89 | Ribosomal_S7 domain-containing protein. | MRP-S28 domain-containing protein. | 0.980 |
PTRG_01412 | PTRG_04928 | B2VW50 | B2W5M8 | Ribosomal_S7 domain-containing protein. | S4 RNA-binding domain-containing protein. | 0.991 |
PTRG_01412 | PTRG_09515 | B2VW50 | B2WHQ6 | Ribosomal_S7 domain-containing protein. | Endosomal cargo receptor (Erp3). | 0.866 |
PTRG_01412 | PTRG_11593 | B2VW50 | B2WNN3 | Ribosomal_S7 domain-containing protein. | Uncharacterized protein. | 0.985 |
PTRG_01418 | PTRG_04423 | B2VW56 | B2W1T8 | Endoplasmic reticulum vesicle protein 25. | COPII vesicle coat component Erp5/Erp6. | 0.994 |
PTRG_01418 | PTRG_08864 | B2VW56 | B2WG08 | Endoplasmic reticulum vesicle protein 25. | Transmembrane emp24 domain containing protein 2. | 0.999 |
PTRG_01418 | PTRG_09515 | B2VW56 | B2WHQ6 | Endoplasmic reticulum vesicle protein 25. | Endosomal cargo receptor (Erp3). | 0.961 |
PTRG_02180 | PTRG_00581 | B2VUZ7 | B2VQY4 | Mitochondrial ribosomal protein s24. | 37S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. | 0.999 |
PTRG_02180 | PTRG_01412 | B2VUZ7 | B2VW50 | Mitochondrial ribosomal protein s24. | Ribosomal_S7 domain-containing protein. | 0.999 |
PTRG_02180 | PTRG_02379 | B2VUZ7 | B2VY89 | Mitochondrial ribosomal protein s24. | MRP-S28 domain-containing protein. | 0.999 |
PTRG_02180 | PTRG_04928 | B2VUZ7 | B2W5M8 | Mitochondrial ribosomal protein s24. | S4 RNA-binding domain-containing protein. | 0.986 |
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