STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_09584CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (581 aa)    
Predicted Functional Partners:
PTRG_03130
GMP synthase.
  
 0.963
PTRG_00987
60S ribosomal protein L25.
   
 
 0.928
PTRG_00273
60S ribosomal protein L16-B.
   
 
 0.926
PTRG_08111
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.924
rps0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.923
PTRG_01790
Uncharacterized protein.
  
 
 0.915
PTRG_07238
Aspartyl-tRNA synthetase.
  
 
 0.913
PTRG_03233
37S ribosomal protein MRP4, mitochondrial.
  
 0.911
PTRG_08769
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.911
PTRG_09868
60S ribosomal protein L5-B.
   
 
 0.911
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.