Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00907 | PTRG_01491 | B2VTR2 | B2VWC9 | CIA30 family protein. | Ubiquitin. | 0.942 |
PTRG_00907 | PTRG_03274 | B2VTR2 | B2VXM8 | CIA30 family protein. | AN1-type zinc finger protein. | 0.905 |
PTRG_00907 | PTRG_04781 | B2VTR2 | B2W581 | CIA30 family protein. | Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.664 |
PTRG_00907 | PTRG_06619 | B2VTR2 | B2W9G1 | CIA30 family protein. | Class E vacuolar protein-sorting machinery protein hse1. | 0.853 |
PTRG_00907 | PTRG_06717 | B2VTR2 | B2W9Q9 | CIA30 family protein. | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | 0.920 |
PTRG_00907 | PTRG_07640 | B2VTR2 | B2WCD1 | CIA30 family protein. | Uncharacterized protein. | 0.801 |
PTRG_00907 | PTRG_09728 | B2VTR2 | B2WIB9 | CIA30 family protein. | Tumor susceptibility protein 101. | 0.925 |
PTRG_00907 | PTRG_11114 | B2VTR2 | B2WMA4 | CIA30 family protein. | Vacuolar protein-sorting-associated protein 36. | 0.920 |
PTRG_00938 | PTRG_01491 | B2VU14 | B2VWC9 | BZIP domain-containing protein. | Ubiquitin. | 0.942 |
PTRG_00938 | PTRG_03274 | B2VU14 | B2VXM8 | BZIP domain-containing protein. | AN1-type zinc finger protein. | 0.905 |
PTRG_00938 | PTRG_04781 | B2VU14 | B2W581 | BZIP domain-containing protein. | Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.664 |
PTRG_00938 | PTRG_06619 | B2VU14 | B2W9G1 | BZIP domain-containing protein. | Class E vacuolar protein-sorting machinery protein hse1. | 0.853 |
PTRG_00938 | PTRG_06717 | B2VU14 | B2W9Q9 | BZIP domain-containing protein. | Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane. | 0.920 |
PTRG_00938 | PTRG_07640 | B2VU14 | B2WCD1 | BZIP domain-containing protein. | Uncharacterized protein. | 0.801 |
PTRG_00938 | PTRG_09728 | B2VU14 | B2WIB9 | BZIP domain-containing protein. | Tumor susceptibility protein 101. | 0.925 |
PTRG_00938 | PTRG_11114 | B2VU14 | B2WMA4 | BZIP domain-containing protein. | Vacuolar protein-sorting-associated protein 36. | 0.920 |
PTRG_01491 | PTRG_00907 | B2VWC9 | B2VTR2 | Ubiquitin. | CIA30 family protein. | 0.942 |
PTRG_01491 | PTRG_00938 | B2VWC9 | B2VU14 | Ubiquitin. | BZIP domain-containing protein. | 0.942 |
PTRG_01491 | PTRG_03274 | B2VWC9 | B2VXM8 | Ubiquitin. | AN1-type zinc finger protein. | 0.945 |
PTRG_01491 | PTRG_04781 | B2VWC9 | B2W581 | Ubiquitin. | Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. | 0.707 |
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