STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_10332Uncharacterized protein. (406 aa)    
Predicted Functional Partners:
PTRG_08120
ELMO domain-containing protein.
    
 0.999
PTRG_00062
40S ribosomal protein S3-2; Belongs to the universal ribosomal protein uS3 family.
  
 0.995
PTRG_00987
60S ribosomal protein L25.
  
 0.995
PTRG_02254
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.995
PTRG_00273
60S ribosomal protein L16-B.
  
 0.995
PTRG_05577
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.995
PTRG_08111
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.995
PTRG_08935
60S ribosomal protein L9-A.
  
 0.995
PTRG_00466
60S ribosomal protein L35.
  
 0.994
PTRG_00528
KOW domain-containing protein.
  
 0.994
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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