Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00907 | PTRG_01491 | B2VTR2 | B2VWC9 | CIA30 family protein. | Ubiquitin. | 0.942 |
PTRG_00907 | PTRG_03274 | B2VTR2 | B2VXM8 | CIA30 family protein. | AN1-type zinc finger protein. | 0.905 |
PTRG_00907 | PTRG_05080 | B2VTR2 | B2W3N0 | CIA30 family protein. | Ubiquitin. | 0.924 |
PTRG_00907 | PTRG_05081 | B2VTR2 | B2W3N1 | CIA30 family protein. | RRN7-type domain-containing protein. | 0.924 |
PTRG_00907 | PTRG_07963 | B2VTR2 | B2WDA4 | CIA30 family protein. | NEDD8-activating enzyme E1 catalytic subunit. | 0.733 |
PTRG_00907 | PTRG_10399 | B2VTR2 | B2WJQ3 | CIA30 family protein. | Ubiquitin carboxyl-terminal hydrolase. | 0.750 |
PTRG_00907 | PTRG_10619 | B2VTR2 | B2WKV9 | CIA30 family protein. | 26S proteasome regulatory subunit RPN11. | 0.926 |
PTRG_00907 | PTRG_11523 | B2VTR2 | B2WN74 | CIA30 family protein. | Neural cell expressed. | 0.908 |
PTRG_00938 | PTRG_01491 | B2VU14 | B2VWC9 | BZIP domain-containing protein. | Ubiquitin. | 0.942 |
PTRG_00938 | PTRG_03274 | B2VU14 | B2VXM8 | BZIP domain-containing protein. | AN1-type zinc finger protein. | 0.905 |
PTRG_00938 | PTRG_05080 | B2VU14 | B2W3N0 | BZIP domain-containing protein. | Ubiquitin. | 0.924 |
PTRG_00938 | PTRG_05081 | B2VU14 | B2W3N1 | BZIP domain-containing protein. | RRN7-type domain-containing protein. | 0.924 |
PTRG_00938 | PTRG_07963 | B2VU14 | B2WDA4 | BZIP domain-containing protein. | NEDD8-activating enzyme E1 catalytic subunit. | 0.733 |
PTRG_00938 | PTRG_10399 | B2VU14 | B2WJQ3 | BZIP domain-containing protein. | Ubiquitin carboxyl-terminal hydrolase. | 0.750 |
PTRG_00938 | PTRG_10619 | B2VU14 | B2WKV9 | BZIP domain-containing protein. | 26S proteasome regulatory subunit RPN11. | 0.926 |
PTRG_00938 | PTRG_11523 | B2VU14 | B2WN74 | BZIP domain-containing protein. | Neural cell expressed. | 0.908 |
PTRG_01491 | PTRG_00907 | B2VWC9 | B2VTR2 | Ubiquitin. | CIA30 family protein. | 0.942 |
PTRG_01491 | PTRG_00938 | B2VWC9 | B2VU14 | Ubiquitin. | BZIP domain-containing protein. | 0.942 |
PTRG_01491 | PTRG_03274 | B2VWC9 | B2VXM8 | Ubiquitin. | AN1-type zinc finger protein. | 0.945 |
PTRG_01491 | PTRG_05080 | B2VWC9 | B2W3N0 | Ubiquitin. | Ubiquitin. | 0.953 |
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