Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00322 | PTRG_00981 | B2VRX3 | B2VU57 | Myosin type-2 heavy chain 2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Alpha-actinin-2. | 0.859 |
PTRG_00322 | PTRG_01150 | B2VRX3 | B2VV83 | Myosin type-2 heavy chain 2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | CRIB domain-containing protein. | 0.859 |
PTRG_00322 | PTRG_10554 | B2VRX3 | B2WKP4 | Myosin type-2 heavy chain 2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Zn(2)-C6 fungal-type domain-containing protein. | 0.536 |
PTRG_00904 | PTRG_03283 | B2VTQ9 | B2VXN7 | Nucleolar GTP-binding protein 2. | CLP1_P domain-containing protein. | 0.718 |
PTRG_00904 | PTRG_05318 | B2VTQ9 | B2W680 | Nucleolar GTP-binding protein 2. | rRNA processing protein Ipi1. | 0.957 |
PTRG_00904 | PTRG_07104 | B2VTQ9 | B2WBU1 | Nucleolar GTP-binding protein 2. | WD domain containing protein. | 0.982 |
PTRG_00904 | PTRG_10554 | B2VTQ9 | B2WKP4 | Nucleolar GTP-binding protein 2. | Zn(2)-C6 fungal-type domain-containing protein. | 0.464 |
PTRG_00904 | erb1 | B2VTQ9 | B2VR76 | Nucleolar GTP-binding protein 2. | Ribosome biogenesis protein erb1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
PTRG_00904 | nop7 | B2VTQ9 | B2WBA7 | Nucleolar GTP-binding protein 2. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
PTRG_00904 | ytm1 | B2VTQ9 | B2VZH2 | Nucleolar GTP-binding protein 2. | Ribosome biogenesis protein ytm1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.997 |
PTRG_00981 | PTRG_00322 | B2VU57 | B2VRX3 | Alpha-actinin-2. | Myosin type-2 heavy chain 2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.859 |
PTRG_00981 | PTRG_10554 | B2VU57 | B2WKP4 | Alpha-actinin-2. | Zn(2)-C6 fungal-type domain-containing protein. | 0.519 |
PTRG_01150 | PTRG_00322 | B2VV83 | B2VRX3 | CRIB domain-containing protein. | Myosin type-2 heavy chain 2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.859 |
PTRG_01150 | PTRG_10554 | B2VV83 | B2WKP4 | CRIB domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.519 |
PTRG_03283 | PTRG_00904 | B2VXN7 | B2VTQ9 | CLP1_P domain-containing protein. | Nucleolar GTP-binding protein 2. | 0.718 |
PTRG_03283 | PTRG_05318 | B2VXN7 | B2W680 | CLP1_P domain-containing protein. | rRNA processing protein Ipi1. | 0.944 |
PTRG_03283 | PTRG_07104 | B2VXN7 | B2WBU1 | CLP1_P domain-containing protein. | WD domain containing protein. | 0.984 |
PTRG_03283 | PTRG_10554 | B2VXN7 | B2WKP4 | CLP1_P domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.543 |
PTRG_03283 | erb1 | B2VXN7 | B2VR76 | CLP1_P domain-containing protein. | Ribosome biogenesis protein erb1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.840 |
PTRG_03283 | nop7 | B2VXN7 | B2WBA7 | CLP1_P domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.746 |
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