STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_10584Beta,beta-carotene 9',10'-dioxygenase. (547 aa)    
Predicted Functional Partners:
PTRG_02589
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.881
PTRG_07366
Bifunctional lycopene cyclase/phytoene synthase; Bifunctional enzyme that catalyzes the reactions from geranylgeranyl diphosphate to phytoene (phytoene synthase) and lycopene to beta-carotene via the intermediate gamma-carotene (lycopene cyclase).
     
 0.832
PTRG_07820
Uncharacterized protein.
     
 0.554
PTRG_08761
Diacylglycerol O-acyltransferase 2A.
     
 0.527
PTRG_07462
Squalene synthetase.
     
 0.520
PTRG_02499
CTR1 suppressor protein.
    
 0.508
PTRG_07497
Aldedh domain-containing protein.
     
 0.504
PTRG_06036
Xanthine dehydrogenase/oxidase.
     
 0.500
PTRG_07698
Xanthine dehydrogenase/oxidase.
     
 0.500
PTRG_05876
Uncharacterized protein.
     
 0.466
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.