Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00932 | PTRG_03925 | B2VU08 | B2W0E0 | RRM domain-containing protein. | ATP-dependent RNA helicase DOB1. | 0.877 |
PTRG_00932 | PTRG_04200 | B2VU08 | B2W165 | RRM domain-containing protein. | Uncharacterized protein. | 0.978 |
PTRG_00932 | PTRG_07253 | B2VU08 | B2WAE0 | RRM domain-containing protein. | Pre-mRNA-splicing factor cwc22. | 0.983 |
PTRG_00932 | PTRG_07300 | B2VU08 | B2WAI7 | RRM domain-containing protein. | Transcriptional repressor rco-1. | 0.978 |
PTRG_00932 | PTRG_07555 | B2VU08 | B2WC46 | RRM domain-containing protein. | Serine/arginine repetitive matrix 1. | 0.992 |
PTRG_00932 | PTRG_09903 | B2VU08 | B2WIU4 | RRM domain-containing protein. | Peptidyl-prolyl cis-trans isomerase cyp8. | 0.769 |
PTRG_00932 | PTRG_10665 | B2VU08 | B2WL05 | RRM domain-containing protein. | Uncharacterized protein. | 0.596 |
PTRG_03925 | PTRG_00932 | B2W0E0 | B2VU08 | ATP-dependent RNA helicase DOB1. | RRM domain-containing protein. | 0.877 |
PTRG_03925 | PTRG_07253 | B2W0E0 | B2WAE0 | ATP-dependent RNA helicase DOB1. | Pre-mRNA-splicing factor cwc22. | 0.981 |
PTRG_03925 | PTRG_07300 | B2W0E0 | B2WAI7 | ATP-dependent RNA helicase DOB1. | Transcriptional repressor rco-1. | 0.982 |
PTRG_03925 | PTRG_08462 | B2W0E0 | B2WE89 | ATP-dependent RNA helicase DOB1. | Uncharacterized protein. | 0.778 |
PTRG_03925 | PTRG_09903 | B2W0E0 | B2WIU4 | ATP-dependent RNA helicase DOB1. | Peptidyl-prolyl cis-trans isomerase cyp8. | 0.983 |
PTRG_03925 | PTRG_10665 | B2W0E0 | B2WL05 | ATP-dependent RNA helicase DOB1. | Uncharacterized protein. | 0.527 |
PTRG_04200 | PTRG_00932 | B2W165 | B2VU08 | Uncharacterized protein. | RRM domain-containing protein. | 0.978 |
PTRG_04200 | PTRG_05361 | B2W165 | B2W6C3 | Uncharacterized protein. | Sde2_N_Ubi domain-containing protein. | 0.738 |
PTRG_04200 | PTRG_07300 | B2W165 | B2WAI7 | Uncharacterized protein. | Transcriptional repressor rco-1. | 0.999 |
PTRG_04200 | PTRG_07555 | B2W165 | B2WC46 | Uncharacterized protein. | Serine/arginine repetitive matrix 1. | 0.982 |
PTRG_04200 | PTRG_09903 | B2W165 | B2WIU4 | Uncharacterized protein. | Peptidyl-prolyl cis-trans isomerase cyp8. | 0.981 |
PTRG_04200 | PTRG_10665 | B2W165 | B2WL05 | Uncharacterized protein. | Uncharacterized protein. | 0.781 |
PTRG_04200 | PTRG_11327 | B2W165 | B2WMW7 | Uncharacterized protein. | Uncharacterized protein. | 0.664 |
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