PTRG_11004 protein (Pyrenophora triticirepentis)

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Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

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Score

PTRG_11004

RNA-binding protein. (614 aa)

Predicted Functional Partners:

PTRG_05592

0.638

PTRG_07440

0.610

PTRG_08445

0.504

PTRG_09442

0.499

PTRG_00625

0.489

PTRG_00724

0.477

utp25

0.475

PTRG_02779

0.469

PTRG_07774

0.468

SPB1

0.465

Your Current Organism:

Pyrenophora triticirepentis

NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PTRG_00625	PTRG_11004	B2VS50	B2WLZ4	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.	RNA-binding protein.	0.489
PTRG_00724	PTRG_02779	B2VSU0	B2VZD9	Pumilio domain containing protein.	Small nucleolar ribonucleoprotein complex subunit.	0.915
PTRG_00724	PTRG_05592	B2VSU0	B2W704	Pumilio domain containing protein.	Elongation factor 3.	0.842
PTRG_00724	PTRG_07440	B2VSU0	B2WAX7	Pumilio domain containing protein.	WD_REPEATS_REGION domain-containing protein.	0.860
PTRG_00724	PTRG_07774	B2VSU0	B2WCR5	Pumilio domain containing protein.	F-box/WD repeat containing protein pof1.	0.872
PTRG_00724	PTRG_08445	B2VSU0	B2WE72	Pumilio domain containing protein.	WD repeat containing protein 36.	0.915
PTRG_00724	PTRG_09442	B2VSU0	B2WHI3	Pumilio domain containing protein.	Periodic tryptophan protein 2.	0.832
PTRG_00724	PTRG_11004	B2VSU0	B2WLZ4	Pumilio domain containing protein.	RNA-binding protein.	0.477
PTRG_00724	SPB1	B2VSU0	B2WIP3	Pumilio domain containing protein.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.907
PTRG_00724	utp25	B2VSU0	B2W0B1	Pumilio domain containing protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.800
PTRG_02779	PTRG_00724	B2VZD9	B2VSU0	Small nucleolar ribonucleoprotein complex subunit.	Pumilio domain containing protein.	0.915
PTRG_02779	PTRG_05592	B2VZD9	B2W704	Small nucleolar ribonucleoprotein complex subunit.	Elongation factor 3.	0.944
PTRG_02779	PTRG_07440	B2VZD9	B2WAX7	Small nucleolar ribonucleoprotein complex subunit.	WD_REPEATS_REGION domain-containing protein.	0.999
PTRG_02779	PTRG_07774	B2VZD9	B2WCR5	Small nucleolar ribonucleoprotein complex subunit.	F-box/WD repeat containing protein pof1.	0.999
PTRG_02779	PTRG_08445	B2VZD9	B2WE72	Small nucleolar ribonucleoprotein complex subunit.	WD repeat containing protein 36.	0.999
PTRG_02779	PTRG_09442	B2VZD9	B2WHI3	Small nucleolar ribonucleoprotein complex subunit.	Periodic tryptophan protein 2.	0.999
PTRG_02779	PTRG_11004	B2VZD9	B2WLZ4	Small nucleolar ribonucleoprotein complex subunit.	RNA-binding protein.	0.469
PTRG_02779	SPB1	B2VZD9	B2WIP3	Small nucleolar ribonucleoprotein complex subunit.	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.939
PTRG_02779	utp25	B2VZD9	B2W0B1	Small nucleolar ribonucleoprotein complex subunit.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.787
PTRG_05592	PTRG_00724	B2W704	B2VSU0	Elongation factor 3.	Pumilio domain containing protein.	0.842