STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_11027Uncharacterized protein. (883 aa)    
Predicted Functional Partners:
PTRG_09516
Ubiquitin carboxyl-terminal hydrolase 21; Belongs to the peptidase C19 family.
    
 
 0.662
PTRG_04571
NUP50 domain-containing protein.
    
 
 0.644
PTRG_04098
Uncharacterized protein.
    
 
 0.595
PTRG_11058
Uncharacterized protein.
 
      0.545
PTRG_10050
Nup188_C domain-containing protein.
    
 
 0.542
PTRG_06238
Nucleoporin Pom152.
    
 
 0.503
PTRG_01080
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
 
      0.455
PTRG_01756
Curved DNA-binding protein.
    
   0.451
PTRG_00860
Uncharacterized protein.
   
 
 0.434
PTRG_11339
Nucleoporin Nup157/170.
    
 
 0.426
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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