Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00533 | PTRG_11331 | B2VQS0 | B2WMX1 | Mitochondrial ribosomal protein subunit S18. | Uncharacterized protein. | 0.532 |
PTRG_01573 | PTRG_05307 | B2VWL1 | B2W669 | Chromodomain-helicase-DNA-binding protein 4. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.634 |
PTRG_01573 | PTRG_08318 | B2VWL1 | B2WDU5 | Chromodomain-helicase-DNA-binding protein 4. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.411 |
PTRG_01573 | PTRG_11331 | B2VWL1 | B2WMX1 | Chromodomain-helicase-DNA-binding protein 4. | Uncharacterized protein. | 0.565 |
PTRG_03443 | PTRG_06249 | B2W1Z5 | B2W8E1 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription factor tfiiic complex subunit sfc4. | 0.881 |
PTRG_03443 | PTRG_10894 | B2W1Z5 | B2WLN4 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription factor tfiiic complex a box associated subunit sfc1. | 0.828 |
PTRG_03443 | PTRG_11331 | B2W1Z5 | B2WMX1 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.557 |
PTRG_04701 | PTRG_10887 | B2W501 | B2WLM7 | Transcription initiation factor TFIID subunit 9. | TATA-binding protein-associated-factor. | 0.999 |
PTRG_04701 | PTRG_11331 | B2W501 | B2WMX1 | Transcription initiation factor TFIID subunit 9. | Uncharacterized protein. | 0.535 |
PTRG_04973 | PTRG_11331 | B2W3C3 | B2WMX1 | Nitrate reductase. | Uncharacterized protein. | 0.791 |
PTRG_05307 | PTRG_01573 | B2W669 | B2VWL1 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Chromodomain-helicase-DNA-binding protein 4. | 0.634 |
PTRG_05307 | PTRG_08318 | B2W669 | B2WDU5 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | 0.989 |
PTRG_05307 | PTRG_11331 | B2W669 | B2WMX1 | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | Uncharacterized protein. | 0.556 |
PTRG_06249 | PTRG_03443 | B2W8E1 | B2W1Z5 | Transcription factor tfiiic complex subunit sfc4. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.881 |
PTRG_06249 | PTRG_10894 | B2W8E1 | B2WLN4 | Transcription factor tfiiic complex subunit sfc4. | Transcription factor tfiiic complex a box associated subunit sfc1. | 0.999 |
PTRG_06249 | PTRG_11331 | B2W8E1 | B2WMX1 | Transcription factor tfiiic complex subunit sfc4. | Uncharacterized protein. | 0.574 |
PTRG_08318 | PTRG_01573 | B2WDU5 | B2VWL1 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Chromodomain-helicase-DNA-binding protein 4. | 0.411 |
PTRG_08318 | PTRG_05307 | B2WDU5 | B2W669 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.989 |
PTRG_08318 | PTRG_11331 | B2WDU5 | B2WMX1 | Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. | Uncharacterized protein. | 0.547 |
PTRG_10887 | PTRG_04701 | B2WLM7 | B2W501 | TATA-binding protein-associated-factor. | Transcription initiation factor TFIID subunit 9. | 0.999 |
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