STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_11359Uncharacterized protein. (392 aa)    
Predicted Functional Partners:
PTRG_01491
Ubiquitin.
   
 0.842
sho1
High osmolarity signaling protein sho1; Plasma membrane osmosensor that activates the high osmolarity glycerol (HOG) MAPK signaling pathway in response to high osmolarity.
    
 0.759
PTRG_06619
Class E vacuolar protein-sorting machinery protein hse1.
    
 0.759
PTRG_06717
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.741
PTRG_07640
Uncharacterized protein.
    
 0.741
PTRG_07105
Uncharacterized protein.
    
 0.667
PTRG_08131
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
    
 0.666
PTRG_00682
TRAF-type zinc finger protein.
    
 0.651
PTRG_00907
CIA30 family protein.
    
 0.606
PTRG_00938
BZIP domain-containing protein.
    
 0.606
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.