STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTRG_11422Polyketide synthase. (1183 aa)    
Predicted Functional Partners:
PTRG_06211
Tryptophan synthase.
  
 
 0.874
PTRG_04659
Histidine biosynthesis trifunctional protein.
   
  
 0.755
PTRG_01753
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.730
PTRG_11926
Phenolpthiocerol synthesis polyketide synthase ppsA.
 
 
  0.564
PTRG_06442
Glycerol:H+ symporter (Gup1); Belongs to the membrane-bound acyltransferase family.
  
  
 0.478
PTRG_01964
4-coumarate-CoA ligase 1.
   
  0.468
PTRG_01996
4-coumarate-CoA ligase 2.
   
  0.468
PTRG_02199
Long-chain-fatty-acid-CoA ligase.
   
  0.468
PTRG_02239
Long-chain-fatty-acid-CoA ligase.
   
  0.468
PTRG_01301
4-coumarate-CoA ligase 1.
   
  0.468
Your Current Organism:
Pyrenophora triticirepentis
NCBI taxonomy Id: 426418
Other names: P. tritici-repentis Pt-1C-BFP, Pyrenophora tritici-repentis Pt-1C-BFP
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