Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PTRG_00585 | PTRG_02816 | B2VQY8 | B2VZH6 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 3'-5' exonuclease domain-containing protein. | 0.995 |
PTRG_00585 | PTRG_04512 | B2VQY8 | B2W4G2 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | DNA repair protein rad50. | 0.999 |
PTRG_00585 | PTRG_07482 | B2VQY8 | B2WB19 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Epoxide hydrolase 2. | 0.501 |
PTRG_00585 | PTRG_09376 | B2VQY8 | B2WHB7 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Epoxide hydrolase. | 0.501 |
PTRG_00585 | PTRG_11820 | B2VQY8 | B2WPB0 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Cytochrome P450 11A1, mitochondrial; Belongs to the cytochrome P450 family. | 0.531 |
PTRG_02816 | PTRG_00585 | B2VZH6 | B2VQY8 | 3'-5' exonuclease domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.995 |
PTRG_02816 | PTRG_04512 | B2VZH6 | B2W4G2 | 3'-5' exonuclease domain-containing protein. | DNA repair protein rad50. | 0.986 |
PTRG_02816 | PTRG_10135 | B2VZH6 | B2WJU6 | 3'-5' exonuclease domain-containing protein. | Cytochrome P450 family member; Belongs to the cytochrome P450 family. | 0.471 |
PTRG_02816 | PTRG_10136 | B2VZH6 | B2WJU7 | 3'-5' exonuclease domain-containing protein. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.471 |
PTRG_02816 | PTRG_11820 | B2VZH6 | B2WPB0 | 3'-5' exonuclease domain-containing protein. | Cytochrome P450 11A1, mitochondrial; Belongs to the cytochrome P450 family. | 0.513 |
PTRG_04512 | PTRG_00585 | B2W4G2 | B2VQY8 | DNA repair protein rad50. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.999 |
PTRG_04512 | PTRG_02816 | B2W4G2 | B2VZH6 | DNA repair protein rad50. | 3'-5' exonuclease domain-containing protein. | 0.986 |
PTRG_04512 | PTRG_11820 | B2W4G2 | B2WPB0 | DNA repair protein rad50. | Cytochrome P450 11A1, mitochondrial; Belongs to the cytochrome P450 family. | 0.530 |
PTRG_04973 | PTRG_06211 | B2W3C3 | B2W653 | Nitrate reductase. | Tryptophan synthase. | 0.803 |
PTRG_04973 | PTRG_07482 | B2W3C3 | B2WB19 | Nitrate reductase. | Epoxide hydrolase 2. | 0.448 |
PTRG_04973 | PTRG_09376 | B2W3C3 | B2WHB7 | Nitrate reductase. | Epoxide hydrolase. | 0.448 |
PTRG_04973 | PTRG_10135 | B2W3C3 | B2WJU6 | Nitrate reductase. | Cytochrome P450 family member; Belongs to the cytochrome P450 family. | 0.768 |
PTRG_04973 | PTRG_10136 | B2W3C3 | B2WJU7 | Nitrate reductase. | Cytochrome P450; Belongs to the cytochrome P450 family. | 0.771 |
PTRG_04973 | PTRG_11820 | B2W3C3 | B2WPB0 | Nitrate reductase. | Cytochrome P450 11A1, mitochondrial; Belongs to the cytochrome P450 family. | 0.780 |
PTRG_06211 | PTRG_04973 | B2W653 | B2W3C3 | Tryptophan synthase. | Nitrate reductase. | 0.803 |
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