STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C4DI36Secreted in xylem 1Secreted in xylem 1 protein. (133 aa)    
Predicted Functional Partners:
A0A0C4DHX7
Secreted in xylem 6Secreted in xylem Six6.
      
 0.470
A0A0C4DI34
Secreted in xylem 2Secreted in xylem 2 protein, SIX2.
      
 0.470
FOXG_05778
Uncharacterized protein.
      
 0.470
FOXG_09820
Uncharacterized protein.
      
 0.470
A0A0D2YBM2
Uncharacterized protein.
      
 0.470
FOXG_14223
Uncharacterized protein.
      
 0.470
A0A0D2YKQ0
Uncharacterized protein.
      
 0.470
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.