STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C4DI43ANK_REP_REGION domain-containing protein. (431 aa)    
Predicted Functional Partners:
FOXG_01011
GTP-binding protein ypt5.
    
 0.756
FOXG_06247
Uncharacterized protein.
    
 0.756
FOXG_09392
Rab family, other.
    
 0.756
FOXG_11158
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.736
FOXG_09088
Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.
    
 0.543
FOXG_10289
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.529
FOXG_04169
Ubiquitin-60S ribosomal protein L40.
    
  0.516
FOXG_03391
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.500
FOXG_08544
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.500
FOXG_05104
Translation initiation factor eIF-2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.497
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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