STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG_00036Pre-rRNA-processing protein PNO1. (256 aa)    
Predicted Functional Partners:
FOXG_08476
Uncharacterized protein.
   
 0.999
FOXG_03441
Uncharacterized protein.
   
 
 0.997
FOXG_01607
Uncharacterized protein.
   
 0.996
A0A0D2XWB1
RIO domain-containing protein.
   
 0.996
FOXG_08265
Bms1-type G domain-containing protein.
   
 
 0.995
FOXG_08981
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.994
FOXG_01531
Periodic tryptophan protein 2.
   
 
 0.993
FOXG_13831
Bms1-type G domain-containing protein.
   
 0.992
FOXG_08092
U3 small nucleolar RNA-associated protein 22.
   
 
 0.973
A0A0D2X9W9
CBF domain-containing protein.
   
 
 0.971
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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