STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG_00151Proteasome component PUP3. (191 aa)    
Predicted Functional Partners:
FOXG_00189
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.999
FOXG_00231
20S proteasome subunit beta 6.
   
 0.999
FOXG_00491
Proteasome subunit alpha type.
   
 0.999
FOXG_00689
Proteasome component PUP1.
   
0.999
FOXG_01936
Proteasome subunit beta.
   
 0.999
A0A0D2XDP0
Proteasome subunit beta.
   
 0.999
FOXG_02134
Proteasome subunit alpha type.
   
 0.999
FOXG_05173
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.999
FOXG_06442
Proteasome subunit alpha type.
   
 0.999
FOXG_07962
Proteasome subunit alpha type.
   
 0.999
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.