STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG_01832Rab-GAP TBC domain-containing protein. (722 aa)    
Predicted Functional Partners:
FOXG_11158
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.977
FOXG_10289
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.867
FOXG_00236
Uncharacterized protein.
   
 
 0.835
FOXG_10439
Ras-like protein Rab-6B.
   
 
 0.722
A0A0D2YKS2
Uncharacterized protein.
      
 0.638
A0A0D2XJR0
Rab-GAP TBC domain-containing protein.
    
 
 0.588
FOXG_07946
Rab-GAP TBC domain-containing protein.
      
0.580
FOXG_05106
Acetyltransferase.
      
 0.559
FOXG_03004
Uncharacterized protein.
  
  
 0.549
FOXG_03665
Sorting nexin-3.
    
 
 0.518
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.