STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG_01934Uncharacterized protein. (1005 aa)    
Predicted Functional Partners:
FOXG_01935
tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance.
 
 
    0.804
A0A0D2Y026
Alginate_lyase domain-containing protein.
    
 0.620
A0A0D2XZK8
USP domain-containing protein; Belongs to the peptidase C19 family.
  
 
  0.572
A0A0D2XR30
Uncharacterized protein.
   
 0.520
A0A0D2XU89
Uncharacterized protein.
   
 0.520
A0A0D2YIM9
Uncharacterized protein.
   
 0.520
FOXG_07988
Uncharacterized protein.
    
 0.512
FOXG_13928
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.485
A0A0D2XCB1
Uncharacterized protein; Belongs to the peptidase C19 family.
    
  0.444
A0A0D2XUC4
Uncharacterized protein.
    
  0.444
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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