STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2XDF9UvrD-helicase domain-containing protein. (84 aa)    
Predicted Functional Partners:
FOXG_00801
DNA repair protein RAD57.
  
 
 0.828
FOXG_03703
DNA repair protein rhp54.
   
 
 0.790
FOXG_00063
Ubiquitin-like domain-containing protein.
    
 
 0.783
FOXG_05249
DNA repair and recombination protein RAD52.
    
 
 0.765
A0A0D2Y514
Uncharacterized protein.
    
 
 0.752
FOXG_01898
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.747
A0A0D2XBM0
Uncharacterized protein.
    
 
 0.747
FOXG_09352
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
  
 0.744
FOXG_00507
Fanconi anemia group M protein.
    
 
 0.743
FOXG_00337
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.733
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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