STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2XDI3Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
FOXG_13642
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.672
FOXG_08457
Prolyl-tRNA synthetase.
  
 
 0.671
FOXG_08363
tRNA (guanine(26)-N(2))-dimethyltransferase.
   
 
 0.635
TSR3
Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family.
   
  
 0.605
A0A0D2Y903
PseudoU_synth_1 domain-containing protein.
  
 
 0.603
A0A0D2XE69
Uncharacterized protein.
   
  
 0.587
A0A0D2XCF5
TruB_N domain-containing protein.
  
  
 0.547
FOXG_08090
tRNA (Guanine-N(1)-)-methyltransferase.
   
  
 0.533
A0A0D2Y926
TRAM domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.531
A0A0D2XUL3
Uncharacterized protein.
   
  
 0.526
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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