STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2XDJ5Uncharacterized protein. (433 aa)    
Predicted Functional Partners:
FOXG_01492
Elongation factor 1-gamma.
   
 
 0.964
FOXG_05685
Aspartyl-tRNA synthetase.
  
  
 0.945
FOXG_12644
Isoleucyl-tRNA synthetase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.924
A0A0D2XAU8
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
0.921
A0A0D2XUR0
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.888
A0A0D2XGL6
Uncharacterized protein.
  
  
 0.867
A0A0D2XCP9
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 
 0.866
FOXG_10487
Uncharacterized protein.
  
  
 0.863
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.848
FOXG_09467
Phenylalanyl-tRNA synthetase, beta subunit.
  
  
 0.823
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.