STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0D2XGD5Cog4 domain-containing protein. (687 aa)    
Predicted Functional Partners:
FOXG_08050
Uncharacterized protein.
    
 0.998
FOXG_08162
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
  
 0.998
FOXG_07579
COG2 domain-containing protein.
   
 0.997
FOXG_09340
Uncharacterized protein.
    
 0.996
FOXG_03674
Syntaxin 5.
    
 0.885
A0A0D2XAB5
Vps53_N domain-containing protein.
   
 
 0.872
A0A0D2XDR5
Vps54 domain-containing protein.
    
 0.870
FOXG_04244
Syntaxin 16; Belongs to the syntaxin family.
     
 0.869
FOXG_04173
Uncharacterized protein.
   
 
 0.867
FOXG_12782
Vesicle transport through interaction with t-SNAREs 1.
     
 0.867
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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