STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG_03056Uncharacterized protein. (814 aa)    
Predicted Functional Partners:
FOXG_09120
RING-type domain-containing protein.
    
 
 0.973
A0A0D2XQI1
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
    
   0.898
A0A0D2XN69
Ribosomal_L18_c domain-containing protein.
    
   0.888
FOXG_10522
50S ribosomal protein L23Ae.
   
   0.878
FOXG_12778
60S ribosomal protein.
   
   0.872
FOXG_00371
60S ribosomal protein L35.
   
   0.848
FOXG_10571
60S ribosomal protein L7.
    
 
 0.804
FOXG_12784
Uncharacterized protein.
    
 
 0.749
FOXG_00307
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 
 0.745
FOXG_04442
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
   
   0.740
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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