STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG_05234Uncharacterized protein. (1973 aa)    
Predicted Functional Partners:
FOXG_02025
Histone acetyltransferase type B subunit 2.
   
 0.977
FOXG_00027
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.921
FOXG_01114
Histone deacetylase 1/2.
   
 0.921
FOXG_00519
Uncharacterized protein.
    
 0.846
FOXG_02789
ENDO3c domain-containing protein.
    
 0.846
FOXG_10563
Uncharacterized protein.
    
 0.769
A0A0D2XDH0
Uncharacterized protein.
   
 0.762
A0A0D2XDH1
HMG box domain-containing protein.
   
 0.762
A0A0D2YC83
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.703
A0A0D2YKU5
MRG domain-containing protein.
    
 0.688
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
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