STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXG_05948Amb_all domain-containing protein. (328 aa)    
Predicted Functional Partners:
FOXG_10728
Pectate lyase E.
  
  
 0.932
A0A0D2Y0F6
Uncharacterized protein.
  
 
 0.923
FOXG_12264
Pectate lyase.
  
  
 0.923
A0A0D2XN78
Uncharacterized protein.
  
  
  0.922
FOXG_13103
Pectate lyase.
  
  
  0.922
FOXG_12330
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
   
 
 0.909
FOXG_04007
Amb_all domain-containing protein.
  
  
 
0.908
FOXG_13801
Amb_all domain-containing protein.
  
  
 
0.906
FOXG_11739
Pectate lyase plyB.
  
  
 
0.902
FOXG_13249
Pectate lyase.
  
  
 
0.902
Your Current Organism:
Fusarium oxysporum f. sp. lycopersici
NCBI taxonomy Id: 426428
Other names: F. oxysporum f. sp. lycopersici 4287, Fusarium oxysporum f. sp. lycopersici 4287
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.